SCHOOL OF MEDICINE / MEDICINE / TIP2500 - DIGESTIVE SYSTEM AND METABOLISM COURSE COMMITTEE

GENERAL INFORMATION ABOUT THE COURSE

           
Course Code Semester   Course Type   Course Level   Course Language
     
  
Course Title Theoretical Practical ECTS
Turkish Name of the Course
Course Coordinator E Mail
Assistant Staff of the Course E Mail
Course Objective
Brief Content of the Course
Prerequisites

Course Objectives
 
Course Objectives 
1Describe basic knowledge and terminology about digestive tract and digestive glands,
2Show and name the organs, glands and other formations of digestive system on cadaver and model,
3Describe the anatomical structure of the inguinal canal, the anterior and lateral walls of the abdomen and understand their importance,
4Describe the histology of the mouth cavity, the structures in it and the parts of pharynx,
5Describe the layers of the digestive tract and the histological properties of each layer,
6Describe the histology of the esophagus, microscopic structure of the stomach, its layers, stomach glands and their functions,
7Describe the surface specializations of the small intestine, the histological stratification of its wall and its cells,
8List the parts of the large intestine and interpret its histological differences,
9Explain the importance of liver in the digestive system, its histological organization, lobulation and functions,
10Explain the histological structure of bile ducts, the layers of bile sac and their histological features,
11Describe the embryology of the pancreas, duct system, its histology, enzymes and functions,
12Explain the embryology of the digestive tract, list the structures that develop from the foregut, midgut and hindgut,
13Describe which structures develop from the esophagus pockets, curves and slits and understand the importance of digestive system anomalies,
14Describe the processes of digestion in the mouth, stomach, small and large intestines,
15Describe the roles of digestive glands during digestion,
16Describe the formation and functions of bile secretion and the factors regulating these functions,
17Describe the role of bile in the digestive tract,
18Describe secretion of pancreatic enzymes and the factors regulating secretion,
19Describe roles of pancreatic enzymes during digestion,
20Describe the absorption occurring in parts of the gastrointestinal tract,
21Identify the basic pathologies and clinical situation that can arise due to disruptions in the digestion and absorption within the gastrointestinal tract,
22Describe metabolic rate, basal metabolic rate and the factors that alter these processes,
23Explain the hunger, satiety, appetite and the physiological mechanisms that regulate these processes,
24Describe the integration of the metabolism,
25Describe the digestion and absorption of carbohydrates,
26Describe the digestion and absorption of lipids,
27List detoxification mechanisms,
28Describe the liver function tests,
29List the systems that are involved in thermoregulation,
30Explain the mechanisms that regulate body temperature,
31Explain the functions of systems that are activated by cold and hot factors,
32Describe terms such as hypothermia and hyperthermia,
33Explain the reactions of the necessary systems for normothermia,
34Describe the similarities and differences between the basic genetic pathways in prokaryotic and eukaryotic cells; define the terms “genetic code, codon and anticodon”,
35Compare mRNA, tRNA, rRNA and the structure of the ribosome in prokaryotic and eukaryotic cells,
36Describe the steps and the components of protein synthesis; interpret the similarities and differences between prokaryotic and eukaryotic cells in terms of protein synthesis,
37Learn about the activation reaction of amino acids involved in protein synthesis and how peptide bonds are formed between amino acids, understand the importance of protein synthesis for the organism,
38Group Post-translational modification (PTM) reactions that occur following synthesis; proteolytic cleavage, formation of disulfide bonds, sulfation, acetylation, glycosylation, and PTM reactions in specific amino acids such as phosphorylation, hydroxylation, methylation and carboxylation, and understand the importance of PTMs for the organism,
39Explain how to inhibit protein synthesis in prokaryotic and eukaryotic cells and the mechanism of action of certain antibiotics,
40Know the metabolic requirements that increase the catabolism of amino acids, and describe the positive and negative nitrogen balance,
41Learn how the amine group present in the structure of amino acids transforms to ammonia and then the urea in hepatocytes; understand transamination, oxidative deamination, amidation and deamidation reactions and their importance for the organism,
42Describe how the ammonia that is produced by the extrahepatic tissues is transported to the liver,
43Discuss the possible causes of ammonia intoxication and the neurotoxic effect of ammonia,
44Learn the steps of the urea cycle together with its enzymes; understand the relationship between the urea cycle and the TCA cycle, and know how the rate of urea cycling is regulated, 46. Identify genetic defects related to the urea cycle,
45Describe metabolic diseases associated with lipid metabolism and enzyme deficiencies related to these diseases,
46Describe enzyme deficiencies related to carbohydrate metabolism and the most common metabolic diseases associated with them,
47Explain metabolic diseases related to amino acid metabolism, especially phenylketonuria,
4850. Define the microbiological properties of enterobacteria and identify colonies of E. coli, Shigella, Salmonella, Proteus, Pseudomonas bacteria,
49Identify mostly encountered pathogens,
50Perform and evaluate antibiograms,
51Evaluate bacteria according to their culture and staining characteristics,
52Understand the importance of serological and molecular biology diagnostic methods for the diagnosis of viruses,
53Identify Ascaris lumbricoides, Trichiuristrichiura, Enterobius vermicularis, Hatchlings, Strongiloides stercoralis, Trichinellaspiralis and Filarials and perform their macroscopic and microscopic diagnosis,
54Identify Taenialar, Hymenolepisnana, Diphyllobotrium latum and Echinococcus, and perform their macroscopic and microscopic diagnosis,
55Make microscopic diagnoses of Fasciolahepatica, Dicrocelium dentriticum and Schistosoma,
56Explain and recognize vector arthropods, scabies, ticks and venomous arthropods,
57Prepare and make a microscopic examination of fresh samples of feces,
58Prepare stained/unstained samples for microscopic examination,
59Remove a tick from where it attached to the patient’s body.
 
Course Category
Course Category Percentage
Basic Vocational Courses